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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3997489_3998100_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3997489 - 3998100

Intron Length:

612

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTAAGGGCT

5'SS Class:

major

3'SS Sequence:

TTTCTCTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAG

U12 Branch Point Sequence:

TCCCCCTTACCA

Flanking Amino Acid:

EPLLGLSGTETSCPIPLKSF

Intron Amino Acid Position:

1982

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

1.3

70.5

38.9

Major BPS

60.8

0.27

1.6

71.4

45.1

Major PPT

84.4

0.77

0.7

77.3

31.4

Minor 5ss

33.2

-1.9

3.6

47.1

Minor BPS

61.9

0.37

1.7

68.36

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005477

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005702

3991303 - 4022202

30900