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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3998654_3999068_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3998654 - 3999068

Intron Length:

415

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TCTGTGCTCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTTAA

U12 Branch Point Sequence:

CGATGCTTAAGC

Flanking Amino Acid:

KDAGPTLVHCSAGVGRSGTF

Intron Amino Acid Position:

1910

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.06

0.8

84.5

29.3

Major BPS

67.1

0.42

1.1

57.7

41.3

Major PPT

74.3

0.55

0.9

65.1

41.2

Minor 5ss

22.3

-3.2

3.8

33.9

41.8

Minor BPS

49.6

-0

2.1

59.6

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005477

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005702

3991303 - 4022202

30900