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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3999832_4000058_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3999832 - 4000058

Intron Length:

227

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAGGTGTG

5'SS Class:

major

3'SS Sequence:

ACCTGTGCCCTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTGTGAC

U12 Branch Point Sequence:

CCTGTCCTACCT

Flanking Amino Acid:

MLTVCMENGRVLCDHYWPSE

Intron Amino Acid Position:

1816

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

1.1

67.1

44.6

Major BPS

0.22

1.2

52.4

43.3

Major PPT

59.4

0.21

0.9

50.2

38.8

Minor 5ss

34.5

-1.8

3.5

39.9

46.1

Minor BPS

45.8

-0.2

63.18

47.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005477

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005702

3991303 - 4022202

30900