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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4000194_4000990_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4000194 - 4000990

Intron Length:

797

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGTGCC

5'SS Class:

major

3'SS Sequence:

GGCTCTTGTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGCCAA

U12 Branch Point Sequence:

AACTTGCCAACT

Flanking Amino Acid:

TDYINANFVPGYTSQQEFIA

Intron Amino Acid Position:

1771

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.5

0.46

1.1

62.6

36.1

Major BPS

0.07

1.4

64.5

42.8

Major PPT

71.5

0.48

68.7

Minor 5ss

31.4

-2.1

3.2

45.9

42.3

Minor BPS

41.5

-0.5

2.3

60.12

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005477

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005702

3991303 - 4022202

30900