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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4002031_4002481_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4002031 - 4002481

Intron Length:

451

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TCATTTCATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

TTCCTCTGGACT

Flanking Amino Acid:

LPQEMVTYSLRNVHRPIPIQ

Intron Amino Acid Position:

1683

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.2

0.99

0.7

26.7

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

78.5

0.64

0.9

73.9

35.6

Minor 5ss

29.9

-2.3

3.2

41.3

45.2

Minor BPS

60.3

0.41

1.5

77.05

39.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005477

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005702

3991303 - 4022202

30900