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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4006031_4006140_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4006031 - 4006140

Intron Length:

110

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TGTTCCCCTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTTAC

U12 Branch Point Sequence:

TCCATGTTACCT

Flanking Amino Acid:

YGVVATTNDSLLRPTQETMS

Intron Amino Acid Position:

1533

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

1.3

79.6

34.4

Major BPS

62.6

0.31

1.2

55.1

41.7

Major PPT

81.8

0.71

0.8

78.3

30.6

Minor 5ss

38.6

-1.3

3.3

51.8

38.6

Minor BPS

45.2

-0.2

2.3

63.22

47.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005477

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005702

3991303 - 4022202

30900