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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4006276_4006500_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4006276 - 4006500

Intron Length:

225

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTTCCTCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTAAC

U12 Branch Point Sequence:

GGCACCCTAACA

Flanking Amino Acid:

VPLLCNTTVEALPPPLRADV

Intron Amino Acid Position:

1488

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

69.3

35.8

Major BPS

59.7

0.24

1.1

61.2

32.6

Major PPT

85.1

0.79

0.7

76.7

31.9

Minor 5ss

28.1

-2.5

27.7

36.2

Minor BPS

54.4

0.13

1.8

62.92

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005477

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005702

3991303 - 4022202

30900