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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4007615_4008305_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4007615 - 4008305

Intron Length:

691

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTAAGTGGT

5'SS Class:

major

3'SS Sequence:

GTTTTCCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGTAAC

U12 Branch Point Sequence:

ATCCCAGTAACT

Flanking Amino Acid:

ASAENISDWTIPSVPKNLSA

Intron Amino Acid Position:

1305

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

69.9

41.1

Major BPS

54.4

0.11

1.2

36.4

Major PPT

87.1

0.83

0.7

81.4

30.6

Minor 5ss

35.7

-1.6

3.3

45.7

43.5

Minor BPS

49.1

0.01

2.3

73.16

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005477

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005702

3991303 - 4022202

30900