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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4009375_4010093_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4009375 - 4010093

Intron Length:

719

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGC|GTGAGTGCC

5'SS Class:

major

3'SS Sequence:

GGTGACTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTAAT

U12 Branch Point Sequence:

CAATCCCTAATA

Flanking Amino Acid:

AAAPNVSGWTRPLPPAAVRL

Intron Amino Acid Position:

1123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.3

0.34

1.3

60.2

39.4

Major BPS

69.6

0.49

1.1

69.5

Major PPT

62.2

0.28

50.9

43.6

Minor 5ss

29.4

-2.4

31.4

35.2

Minor BPS

59.8

0.3

1.7

66.33

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005477

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005702

3991303 - 4022202

30900