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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4010367_4010719_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4010367 - 4010719

Intron Length:

353

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTGAGTATG

5'SS Class:

major

3'SS Sequence:

ATTTTCTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCCAAT

U12 Branch Point Sequence:

CTGCCAATAAGC

Flanking Amino Acid:

TSTPNLTHCTRPLPPVSVHW

Intron Amino Acid Position:

1032

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

1.2

77.8

38.7

Major BPS

56.7

0.17

1.4

64.7

Major PPT

81.9

0.72

0.8

74.2

35.9

Minor 5ss

35.3

-1.7

2.8

41.7

38.2

Minor BPS

43.4

-0.5

2.1

53.9

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005477

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005702

3991303 - 4022202

30900