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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4012187_4012649_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4012187 - 4012649

Intron Length:

463

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAGGGAGG

5'SS Class:

major

3'SS Sequence:

TTCTCTCCCACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

TCCCCTGTAATG

Flanking Amino Acid:

TSSQTAIGYTVPLPPLSLSA

Intron Amino Acid Position:

761

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.45

1.2

55.2

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

81.5

0.71

0.7

76.3

25.9

Minor 5ss

29.8

-2.3

3.3

30.4

43.1

Minor BPS

47.2

-0.3

2.1

51.64

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005477

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005702

3991303 - 4022202

30900