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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4012920_4013288_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4012920 - 4013288

Intron Length:

369

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCCTCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTCAC

U12 Branch Point Sequence:

GCTCACAGATTT

Flanking Amino Acid:

SSSHFATEWTYPLSLANVSA

Intron Amino Acid Position:

671

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

75.7

28.1

Major BPS

65.1

0.38

1.1

68.9

36.5

Major PPT

77.5

0.62

0.8

70.3

36.4

Minor 5ss

-2.4

3.2

35.5

41.5

Minor BPS

-0.7

1.9

53.42

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005477

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005702

3991303 - 4022202

30900