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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4015016_4015285_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4015016 - 4015285

Intron Length:

270

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGCAGA

5'SS Class:

major

3'SS Sequence:

CTGTCTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGAAAT

U12 Branch Point Sequence:

AATTCTGTGATT

Flanking Amino Acid:

ASAHSAAAWTQPLAPSGVSL

Intron Amino Acid Position:

403

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.3

68.9

43.8

Major BPS

59.4

0.23

1.2

65.3

38.6

Major PPT

82.4

0.73

0.8

76.8

31.8

Minor 5ss

40.1

-1.1

2.8

47.9

41.4

Minor BPS

53.5

0.19

73.5

37.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005477

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005702

3991303 - 4022202

30900