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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4018280_4018978_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4018280 - 4018978

Intron Length:

699

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGGGGT

5'SS Class:

major

3'SS Sequence:

ATGTCTCATTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

CCATCCGTACCA

Flanking Amino Acid:

TARETVTAQTSPSPVRNLSL

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

70.6

39.9

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

73.9

0.54

39.4

Minor 5ss

32.7

-2

3.7

46.6

43.3

Minor BPS

47.4

-0.2

2.3

59.37

46.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005477

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005702

3991303 - 4022202

30900