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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4019246_4021197_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4019246 - 4021197

Intron Length:

1952

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCCGA

5'SS Class:

strong_major

3'SS Sequence:

CTTGCTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TTTTCCATACCT

Flanking Amino Acid:

LEGQDAPGDRGMLLNLSVSD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

68.9

43.8

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

82.6

0.73

0.8

76.9

31.8

Minor 5ss

37.2

-1.4

47.5

Minor BPS

70.4

0.72

1.9

93.11

35.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005477

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005702

3991303 - 4022202

30900