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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4040453_4040692_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4040453 - 4040692

Intron Length:

240

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAGGCAGG

5'SS Class:

major

3'SS Sequence:

TCCTCTGTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTAAC

U12 Branch Point Sequence:

TGCCCCCTAACA

Flanking Amino Acid:

VEEKFMTMVLGIGPVLGLVF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.5

0.44

1.2

54.5

49.7

Major BPS

59.7

0.24

1.1

61.2

32.6

Major PPT

80.2

0.68

0.8

37.9

Minor 5ss

36.9

-1.5

3.1

39.5

46.2

Minor BPS

61.4

0.35

1.7

70.78

40.8

Associated Gene:

Gene:

SLC45A3

Ensembl Gene ID:

ENSAPLG00000005321

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005488

4034474 - 4058500

24027