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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4041113_4058393_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

4041113 - 4058393

Intron Length:

17281

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTCTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCCTAAC

U12 Branch Point Sequence:

CCGTGCCTAACG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

1.2

77.6

32.8

Major BPS

54.3

0.11

1.2

57.5

37.5

Major PPT

85.5

0.8

0.7

84.1

23.8

Minor 5ss

27.4

-2.6

2.9

31.8

42.6

Minor BPS

46.5

-0.4

2.2

51.3

48.8

Associated Gene:

Gene:

SLC45A3

Ensembl Gene ID:

ENSAPLG00000005321

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005488

4034474 - 4058500

24027