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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4079928_4080706_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4079928 - 4080706

Intron Length:

779

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTGAGTAAT

5'SS Class:

major

3'SS Sequence:

CTTGTTTCAGAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTAAT

U12 Branch Point Sequence:

CAAAGCTTAATT

Flanking Amino Acid:

QEDDEAQFQENSGSDEDFLM

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

76.8

33.7

Major BPS

69.2

0.48

1.3

71.9

Major PPT

66.1

0.36

1.1

68.8

36.2

Minor 5ss

33.2

-1.9

2.8

38.8

40.3

Minor BPS

53.5

0.19

1.8

66.68

Associated Gene:

Gene:

NUCKS1

Ensembl Gene ID:

ENSAPLG00000026584

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042731

4076904 - 4090124

13221

ENSAPLT00000033404

4076904 - 4092457

15554