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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4080860_4081554_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4080860 - 4081554

Intron Length:

695

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGAAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTGCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAC

U12 Branch Point Sequence:

TTCGTTATAACA

Flanking Amino Acid:

RASKSRKRPAEDSEDEKEDH

Intron Amino Acid Position:

127

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

77.3

32.6

Major BPS

77.9

0.69

78.3

31.3

Major PPT

79.1

0.65

0.9

37.4

Minor 5ss

30.9

-2.2

3.2

46.4

Minor BPS

54.1

0.12

1.7

67.02

Associated Gene:

Gene:

NUCKS1

Ensembl Gene ID:

ENSAPLG00000026584

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042731

4076904 - 4090124

13221

ENSAPLT00000033404

4076904 - 4092457

15554