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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4081705_4082031_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4081705 - 4082031

Intron Length:

327

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCATAT

U12 Branch Point Sequence:

AGCTTCATATTC

Flanking Amino Acid:

KTKKDDSHSADEDFGSEDDD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

1.1

81.4

32.7

Major BPS

74.2

0.6

69.3

38.4

Major PPT

92.7

0.96

0.6

85.4

29.3

Minor 5ss

41.6

-0.9

2.6

43.3

Minor BPS

46.1

-0.3

1.8

53.76

38.3

Associated Gene:

Gene:

NUCKS1

Ensembl Gene ID:

ENSAPLG00000026584

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042731

4076904 - 4090124

13221

ENSAPLT00000033404

4076904 - 4092457

15554