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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4082088_4084408_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4082088 - 4084408

Intron Length:

2321

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAGAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCTGTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

CACCAATTAAAA

Flanking Amino Acid:

RRSGKNSQEDSEDSEEKDVK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

73.7

30.1

Major BPS

73.8

0.59

0.9

26.8

Major PPT

82.2

0.72

0.8

80.6

31.4

Minor 5ss

29.1

-2.4

3.4

37.8

Minor BPS

44.3

-0.4

1.8

49.88

40.1

Associated Gene:

Gene:

NUCKS1

Ensembl Gene ID:

ENSAPLG00000026584

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042731

4076904 - 4090124

13221

ENSAPLT00000033404

4076904 - 4092457

15554