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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4084515_4085556_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4084515 - 4085556

Intron Length:

1042

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

CTGTCCTATCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

TGATTCAAAACC

Flanking Amino Acid:

YSQFQESDDADEDYGRDSGP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.89

0.9

77.6

30.7

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

74.3

0.55

0.9

39.9

Minor 5ss

33.1

-1.9

3.2

40.3

40.2

Minor BPS

49.7

-0

1.9

64.7

40.5

Associated Gene:

Gene:

NUCKS1

Ensembl Gene ID:

ENSAPLG00000026584

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042731

4076904 - 4090124

13221

ENSAPLT00000033404

4076904 - 4092457

15554