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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4098155_4098815_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4098155 - 4098815

Intron Length:

661

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGCACA

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTCTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAC

U12 Branch Point Sequence:

AAGAAAATAACC

Flanking Amino Acid:

KENKNINESMRVLIEKMMSS

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

71.6

40.2

Major BPS

61.3

0.28

30.6

Major PPT

78.6

0.64

0.9

70.2

41.3

Minor 5ss

38.3

-1.3

3.1

49.3

46.7

Minor BPS

42.5

-0.5

1.9

50.76

38.6

Associated Gene:

Gene:

RAB29

Ensembl Gene ID:

ENSAPLG00000004926

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005090

4098037 - 4103461

5425