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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4100193_4101423_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4100193 - 4101423

Intron Length:

1231

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTCAC

5'SS Class:

strong_major

3'SS Sequence:

TTTGATCCTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTCCTTTTGATC

Flanking Amino Acid:

TVRLQLWDIAGQERFTSMTR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

72.5

39.1

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

69.1

0.43

1.1

68.9

37.2

Minor 5ss

33.4

-1.9

3.1

43.8

43.9

Minor BPS

59.5

0.28

1.2

65.76

34.3

Associated Gene:

Gene:

RAB29

Ensembl Gene ID:

ENSAPLG00000004926

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005090

4098037 - 4103461

5425