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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4105385_4109182_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4105385 - 4109182

Intron Length:

3798

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

TTATTGCTGCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAT

U12 Branch Point Sequence:

AATTGCAGAACT

Flanking Amino Acid:

DGAAGRPSKRETQDENGKTQ

Intron Amino Acid Position:

148

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

82.2

0.8

0.9

81.6

Major PPT

72.5

0.51

1.1

45.1

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

49.2

0.02

2.1

74.05

Associated Gene:

Gene:

RSBN1

Ensembl Gene ID:

ENSAPLG00000004887

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005037

4104943 - 4119066

14124