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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4123700_4123792_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4123700 - 4123792

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACGGCG

5'SS Class:

major

3'SS Sequence:

TTCGGCTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

GGAGCGCTGACG

Flanking Amino Acid:

EKAIEQTEMKGFKSKPKKKG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.2

61.4

42.5

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

71.8

0.49

0.9

65.3

36.2

Minor 5ss

35.1

-1.7

3.5

47.6

Minor BPS

39.1

-1

2.3

41.68

42.7

Associated Gene:

Gene:

PHTF1

Ensembl Gene ID:

ENSAPLG00000004512

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004656

4123534 - 4133654

10121