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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4125199_4125952_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4125199 - 4125952

Intron Length:

754

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAGAG

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCTAATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTTCTTCTAATC

Flanking Amino Acid:

SGNNGLSRRRRKLRKSVGVD

Intron Amino Acid Position:

164

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.8

71.2

34.6

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

77.8

0.63

0.9

78.6

33.6

Minor 5ss

24.3

-3

3.1

28.4

43.8

Minor BPS

58.5

0.25

1.6

71.85

33.1

Associated Gene:

Gene:

PHTF1

Ensembl Gene ID:

ENSAPLG00000004512

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004656

4123534 - 4133654

10121