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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4126079_4126696_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4126079 - 4126696

Intron Length:

618

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

AAGCACTTAATT

Flanking Amino Acid:

NSLFGMLFRRRVRRIKMVAE

Intron Amino Acid Position:

206

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

83.1

28.6

Major BPS

78.2

0.7

77.9

32.1

Major PPT

88.5

0.87

0.6

24.1

Minor 5ss

40.4

-1.1

3.2

57.3

47.4

Minor BPS

60.2

0.4

1.5

70.49

40.1

Associated Gene:

Gene:

PHTF1

Ensembl Gene ID:

ENSAPLG00000004512

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004656

4123534 - 4133654

10121