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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4127820_4127899_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4127820 - 4127899

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTCATG

5'SS Class:

major

3'SS Sequence:

TTGTTTTTGGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATGGAT

U12 Branch Point Sequence:

TTTTCCTTTGTT

Flanking Amino Acid:

LISLNQAVSQVKEALKGARD

Intron Amino Acid Position:

317

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.1

65.7

45.6

Major BPS

63.6

0.34

1.4

63.4

44.3

Major PPT

82.2

0.72

80.6

Minor 5ss

-0.9

3.1

57.6

46.7

Minor BPS

48.6

-0

3.6

87.87

37.8

Associated Gene:

Gene:

PHTF1

Ensembl Gene ID:

ENSAPLG00000004512

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004656

4123534 - 4133654

10121