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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4127978_4128573_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4127978 - 4128573

Intron Length:

596

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGTTG

5'SS Class:

strong_major

3'SS Sequence:

TTCGTCTTCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTAAAT

U12 Branch Point Sequence:

TCGTCTTCAAAG

Flanking Amino Acid:

SELESTIYSQDSRSCISVGS

Intron Amino Acid Position:

343

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

70.6

42.2

Major BPS

67.2

0.43

1.2

73.3

39.1

Major PPT

69.4

0.44

70.2

34.2

Minor 5ss

39.3

-1.2

3.5

55.1

49.1

Minor BPS

51.9

-0

1.7

56.49

45.1

Associated Gene:

Gene:

PHTF1

Ensembl Gene ID:

ENSAPLG00000004512

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004656

4123534 - 4133654

10121