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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4130652_4130783_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4130652 - 4130783

Intron Length:

132

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TTTATTTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

GTGTCTTTATTT

Flanking Amino Acid:

IWLSLRSYLKRRGPQRSVDV

Intron Amino Acid Position:

591

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.01

0.7

86.6

23.3

Major BPS

83.9

0.84

73.9

41.3

Major PPT

89.5

0.89

0.7

85.1

29.5

Minor 5ss

37.4

-1.4

2.9

50.4

Minor BPS

63.6

0.5

1.6

76.16

41.2

Associated Gene:

Gene:

PHTF1

Ensembl Gene ID:

ENSAPLG00000004512

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004656

4123534 - 4133654

10121