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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4138272_4139718_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4138272 - 4139718

Intron Length:

1447

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTATGTCAT

5'SS Class:

major

3'SS Sequence:

TGTTTACTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

ATTTAATCAAAT

Flanking Amino Acid:

RPGTGLIPDHSDWDSYNPSS

Intron Amino Acid Position:

1113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.5

0.44

1.1

64.7

41.1

Major BPS

90.7

1.01

0.7

19.9

Major PPT

83.3

0.75

0.9

74.4

40.4

Minor 5ss

44.2

-0.6

2.9

63.9

41.5

Minor BPS

48.9

-0

75.07

40.5

Associated Gene:

Gene:

MAGI3

Ensembl Gene ID:

ENSAPLG00000002599

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002727

4137178 - 4195755

58578