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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4138806_4139718_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4138806 - 4139718

Intron Length:

913

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTATGTCAT

5'SS Class:

major

3'SS Sequence:

CTTCCTTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGGTAT

U12 Branch Point Sequence:

TGGTATGTAGTT

Flanking Amino Acid:

RPGTGLIPDHSLAPSSLCPY

Intron Amino Acid Position:

1113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.5

0.44

1.1

64.7

41.1

Major BPS

56.4

0.16

1.6

57.4

49.1

Major PPT

86.5

0.82

0.7

84.5

23.3

Minor 5ss

44.2

-0.6

2.9

63.9

41.5

Minor BPS

42.7

-0.4

2.2

61.1

43.3

Associated Gene:

Gene:

MAGI3

Ensembl Gene ID:

ENSAPLG00000002599

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047510

4138716 - 4195755

57040