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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4139858_4141222_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4139858 - 4141222

Intron Length:

1365

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

ATTTTCTTACCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

ATTTTCTTACCA

Flanking Amino Acid:

GPAVKDGRVHVGDQIVEING

Intron Amino Acid Position:

1067

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

76.9

34.5

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

81.2

0.7

0.9

39.2

Minor 5ss

40.8

-1

53.8

43.6

Minor BPS

72.4

0.7

1.5

81.19

34.3

Associated Gene:

Gene:

MAGI3

Ensembl Gene ID:

ENSAPLG00000002599

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047510

4138716 - 4195755

57040

ENSAPLT00000002727

4137178 - 4195755

58578