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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4142203_4145698_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4142203 - 4145698

Intron Length:

3496

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

TTGAATTTATTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGAAT

U12 Branch Point Sequence:

TTTGTTTGAATT

Flanking Amino Acid:

VVTLTVVAEEEHRGPPSGTN

Intron Amino Acid Position:

940

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

74.6

0.61

1.4

34.5

Major PPT

68.1

0.41

67.3

43.3

Minor 5ss

31.7

-2.1

3.1

39.7

45.9

Minor BPS

62.5

0.47

1.5

79.72

Associated Gene:

Gene:

MAGI3

Ensembl Gene ID:

ENSAPLG00000002599

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047510

4138716 - 4195755

57040

ENSAPLT00000002727

4137178 - 4195755

58578