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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4145885_4147345_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4145885 - 4147345

Intron Length:

1461

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

CTTGACTCCCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

CTGCTCTTGACT

Flanking Amino Acid:

LTSKNKPPPGVIPHKIGRVI

Intron Amino Acid Position:

878

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

77.9

36.8

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

67.4

0.39

0.9

58.6

Minor 5ss

36.4

-1.5

3.3

46.1

43.6

Minor BPS

66.4

0.6

1.3

75.88

41.2

Associated Gene:

Gene:

MAGI3

Ensembl Gene ID:

ENSAPLG00000002599

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047510

4138716 - 4195755

57040

ENSAPLT00000002727

4137178 - 4195755

58578