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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4151055_4153090_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4151055 - 4153090

Intron Length:

2036

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

GGCTCTGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

GGTTTAATACAT

Flanking Amino Acid:

PPSPTKTGKGKDKQDSSGSL

Intron Amino Acid Position:

670

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

86.9

30.1

Major BPS

81.8

0.79

1.1

34.5

Major PPT

72.8

0.51

68.7

Minor 5ss

35.8

-1.6

2.9

43.1

43.9

Minor BPS

41.8

-0.5

60.95

41.9

Associated Gene:

Gene:

MAGI3

Ensembl Gene ID:

ENSAPLG00000002599

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047510

4138716 - 4195755

57040

ENSAPLT00000002727

4137178 - 4195755

58578