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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4154285_4155697_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4154285 - 4155697

Intron Length:

1413

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATTAC

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTTTAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

CCTTTTTTAACA

Flanking Amino Acid:

PAAQDGRIAPGDVIVDINGN

Intron Amino Acid Position:

456

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.88

0.9

80.8

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

83.2

0.75

0.8

80.1

30.5

Minor 5ss

39.8

-1.1

2.9

45.2

Minor BPS

73.1

0.72

1.2

73.92

38.7

Associated Gene:

Gene:

MAGI3

Ensembl Gene ID:

ENSAPLG00000002599

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047510

4138716 - 4195755

57040

ENSAPLT00000002727

4137178 - 4195755

58578