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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4159993_4160809_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4159993 - 4160809

Intron Length:

817

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTGAGTAGC

5'SS Class:

major

3'SS Sequence:

TTTTGCTCCACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTTCTTTTAATG

Flanking Amino Acid:

YTDTGMIYFIDHNTKTTTWL

Intron Amino Acid Position:

315

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

40.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

82.2

0.73

0.8

76.7

32.1

Minor 5ss

31.9

-2.1

2.7

33.3

35.4

Minor BPS

63.4

0.28

1.3

63.63

39.2

Associated Gene:

Gene:

MAGI3

Ensembl Gene ID:

ENSAPLG00000002599

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047510

4138716 - 4195755

57040

ENSAPLT00000002727

4137178 - 4195755

58578