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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4162461_4164567_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4162461 - 4164567

Intron Length:

2107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTTGA

5'SS Class:

major

3'SS Sequence:

GTCTCATTGTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTGAT

U12 Branch Point Sequence:

ATTATCTTGATT

Flanking Amino Acid:

GALLESGTYDGNFYGTPKPP

Intron Amino Acid Position:

187

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

69.4

37.6

Major BPS

83.8

0.84

73.6

41.8

Major PPT

70.8

0.47

69.5

40.7

Minor 5ss

45.8

-0.4

2.5

55.3

44.2

Minor BPS

69.5

0.69

1.2

81.49

33.7

Associated Gene:

Gene:

MAGI3

Ensembl Gene ID:

ENSAPLG00000002599

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047510

4138716 - 4195755

57040

ENSAPLT00000002727

4137178 - 4195755

58578