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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4165659_4195433_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4165659 - 4195433

Intron Length:

29775

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCAG

5'SS Class:

strong_major

3'SS Sequence:

TTAAAATTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TCTTTTTTAAAA

Flanking Amino Acid:

EPVRLKTVRPGKVINKDLRH

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

64.9

42.8

Major BPS

90.4

0.7

90.2

19.3

Major PPT

63.4

0.3

1.2

65.3

44.4

Minor 5ss

31.8

-2.1

37.6

47.1

Minor BPS

70.6

0.64

1.3

75.65

35.9

Associated Gene:

Gene:

MAGI3

Ensembl Gene ID:

ENSAPLG00000002599

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047510

4138716 - 4195755

57040

ENSAPLT00000002727

4137178 - 4195755

58578