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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4221817_4223113_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4221817 - 4223113

Intron Length:

1297

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TGCTGTTTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAG

U12 Branch Point Sequence:

TTAAGAGTATTT

Flanking Amino Acid:

AGSYVHKGTDGGTAPLVICS

Intron Amino Acid Position:

910

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

79.4

28.8

Major BPS

63.3

0.33

1.6

73.3

39.1

Major PPT

71.3

0.48

1.1

64.8

45.7

Minor 5ss

32.1

-2

3.1

36.8

41.9

Minor BPS

36.8

-0.9

2.5

58.46

44.6

Associated Gene:

Gene:

LRIG2

Ensembl Gene ID:

ENSAPLG00000001904

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002002

4220457 - 4236594

16138