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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4234552_4235076_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4234552 - 4235076

Intron Length:

525

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

TCTTCTTTCGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

ACATTCTGAAAG

Flanking Amino Acid:

ASFPRMQLKYLNLSNNRITT

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

75.1

40.8

Major BPS

82.1

0.8

71.6

36.4

Major PPT

83.4

0.75

0.7

80.4

24.9

Minor 5ss

42.3

-0.9

2.9

61.4

42.8

Minor BPS

49.8

-0.1

1.6

52.65

41.6

Associated Gene:

Gene:

LRIG2

Ensembl Gene ID:

ENSAPLG00000001904

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002002

4220457 - 4236594

16138