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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4235212_4235695_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4235212 - 4235695

Intron Length:

484

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGTAGC

5'SS Class:

major

3'SS Sequence:

TTACGTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTGAT

U12 Branch Point Sequence:

TGTTGCTTACGT

Flanking Amino Acid:

ETTSNITLLSLVHNTIPEIN

Intron Amino Acid Position:

143

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.1

70.9

39.2

Major BPS

72.4

0.56

1.2

63.1

44.4

Major PPT

83.2

0.75

0.9

80.7

36.7

Minor 5ss

38.7

-1.3

2.8

51.8

39.1

Minor BPS

50.2

0.08

2.3

76.24

46.3

Associated Gene:

Gene:

LRIG2

Ensembl Gene ID:

ENSAPLG00000001904

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002002

4220457 - 4236594

16138