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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4344103_4352051_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

4344103 - 4352051

Intron Length:

7949

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGCGCGCA

5'SS Class:

major

3'SS Sequence:

CCCGGTCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

CCCTGCTCACCC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

62.2

38.5

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

64.4

0.32

0.9

56.9

33.5

Minor 5ss

30.1

-2.3

3.4

38.8

46.4

Minor BPS

42.8

-0.5

2.2

49.59

47.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016291

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031879

4343386 - 4353642

10257