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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4352210_4352470_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4352210 - 4352470

Intron Length:

261

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

CTCTGCCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

AGCTGCTGAGCC

Flanking Amino Acid:

IADIEVDGKQVELALWDTAG

Intron Amino Acid Position:

127

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

67.9

37.4

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

71.8

0.49

0.8

64.6

Minor 5ss

24.1

-3

3.3

42.8

Minor BPS

-0.4

54.52

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016291

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031879

4343386 - 4353642

10257

ENSAPLT00000031669

4351168 - 4353208

2041

ENSAPLT00000016997

4351168 - 4353392

2225