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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4352592_4352864_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4352592 - 4352864

Intron Length:

273

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAGGGCCC

5'SS Class:

major

3'SS Sequence:

CTGCCTCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCCAAT

U12 Branch Point Sequence:

TGCCCCTTGGCT

Flanking Amino Acid:

CFSIDSPDSLENIPEKWTPE

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.4

0.43

1.1

55.8

40.2

Major BPS

48.8

-0

1.3

56.3

37.4

Major PPT

71.4

0.48

0.8

65.4

30.4

Minor 5ss

31.1

-2.2

3.5

43.2

44.1

Minor BPS

45.4

-0.2

3.5

73.58

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016291

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031879

4343386 - 4353642

10257

ENSAPLT00000031669

4351168 - 4353208

2041

ENSAPLT00000016997

4351168 - 4353392

2225