Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_27_4354578_4354663_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4354578 - 4354663

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCTC

5'SS Class:

strong_major

3'SS Sequence:

CTGTGCCCACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAG

U12 Branch Point Sequence:

CTGTGCCCACCA

Flanking Amino Acid:

VVLSTDPHWHRFLRYCKEKG

Intron Amino Acid Position:

1101

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

72.2

39.5

Major BPS

55.8

0.14

1.6

65.3

43.7

Major PPT

64.6

0.33

55.9

40.1

Minor 5ss

-1.5

3.2

50.1

46.5

Minor BPS

39.2

-0.8

2.3

51.75

Associated Gene:

Gene:

MOV10

Ensembl Gene ID:

ENSAPLG00000015955

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016673

4353969 - 4360735

6767