Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_27_4356324_4356511_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4356324 - 4356511

Intron Length:

188

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGAGTC

5'SS Class:

major

3'SS Sequence:

TGCCTTTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTCAC

U12 Branch Point Sequence:

GCAGCCTCACGC

Flanking Amino Acid:

IIITTLVTAGRLASANFPPC

Intron Amino Acid Position:

792

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

1.3

73.3

36.4

Major BPS

64.9

0.37

29.8

Major PPT

76.5

0.6

0.8

68.7

37.2

Minor 5ss

30.4

-2.2

3.4

41.8

44.9

Minor BPS

40.4

-0.7

43.69

43.8

Associated Gene:

Gene:

MOV10

Ensembl Gene ID:

ENSAPLG00000015955

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016673

4353969 - 4360735

6767