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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4357386_4357525_R


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
4357386 - 4357525

Intron Length:
140

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAA|GTGAGTGGT

5'SS Class:
strong_major

3'SS Sequence:
CGCTCCTTCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GGCTCAC

U12 Branch Point Sequence:
CCTGGCTCACGC

Flanking Amino Acid:
LEKVRLGFSSKLKSKFVNKL

Intron Amino Acid Position:
595

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.2
0.74
0.9
75
35.2

Major BPS
52.1
0.05
1.3
57
41.8

Major PPT
73.4
0.53
0.8
64.5
36.5

Minor 5ss
30.7
-2.2
3.3
40.4
40

Minor BPS
35.8
-1.1
2.2
41.23
45.7

Associated Gene:

Gene:
MOV10

Ensembl Gene ID:

Chromosome:
27

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4353969 - 4360735
6767